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DESCRIPTION
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DESCRIPTION
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Package: limiric
Title: Detect Damaged Cells in Single-Cell RNA Sequencing Data
Version: 2.0.0
Authors@R:
person("Alicen", "Henning", email = "alicen.jhb@gmail.com", role = c("aut", "cre", "cph"))
Description:
A quality control tool for high-precision, sample-specific detection of
damaged cells in single-cell RNA sequencing (scRNA-seq) data.
The core limiric function processes raw scRNA-seq alignment files to predict
which barcodes correspond to damaged cells and outputs these
predictions in a csv file alongside a filtered 'Seurat' object.
License: MIT + file LICENSE
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
Depends:
R (>= 2.10)
LazyData: true
Imports:
cowplot,
dplyr,
ggplot2,
methods,
png,
Seurat,
SoupX
Suggests:
knitr,
rmarkdown
VignetteBuilder: knitr
URL: https://github.com/AlicenJoyHenning/limiric
BugReports: https://github.com/AlicenJoyHenning/limiric/issues