Tools not installing well for the tool_list_final.yml with GKS

[drosofff]

• mirdeep2
• mirdeep2_quantifier
• package_biocbasics_2_14 (not surprisingly)
• package_gnu_coreutils_8_25 (not surprisingly)
• package_gnu_coreutils_8_25 (not surprisingly)
• package_ngs_tools_0_1_8
• package_perl_5_18 (linked to package_gnu_coreutils)
• package_perl_pdf_api2_2_023
• package_randfold_2_0
• package_squid_1_9g
• package_trinityrnaseq_r20140717
• package_trnascan_1_3_1
• package_twobittofa
• sample
• trinityrnaseq

see which tools/packages are grouped to trigger error
test other installation instances to see the reproducibility of the error
connect with better management of conda packages when they exist for tools (dependency_resolver_conf.yml)