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S_gen.txt
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# file: S_gen.txt
# date: 2025-01-15
# version: IPD-IMGT/HLA 3.59.0
# origin: https://github.com/ANHIG/IMGTHLA/blob/Latest/alignments/S_gen.txt
# repository: https://raw.githubusercontent.com/ANHIG/IMGTHLA/Latest/alignments/S_gen.txt
# author: IPD Team (ipdsubs@anthonynolan.org)
gDNA 1
|
S*01:01:01:01 CACCAAAGAC CAAAGCTAAC TTTGTATCTA CTATGTACCA AGTATGTCTT TACATACCGT GCAGTTGGTT CAGTCCTCAC ACCTGCTTTC TTCATGTTTC
S*01:01:01:02 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
S*01:02:01:01 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- C---------
S*01:02:01:02 ********** ********** ********** ********** ********** ********** ********** ********** ********** **********
S*01:02:01:03 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- C---------
S*01:03 ---------- ---------- ---------- --------A- ---------- ---------- ---------- ---------- ---------- C---------
S*01:04 ---------- ---------- ---------- --------A- ---------- ---------- ---------- ---------- ---------- C---------
gDNA 101
|
S*01:01:01:01 CTGCGCTGGG TCTGCAGTCA CAGTTTTGGA AACTTCTCTG GGGTCCAAGA CTAGGGGGTT CCTCTAGGAC CTCATGGCCC TGTCTCTTCC CTAGCCCCTC
S*01:01:01:02 ----C----- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
S*01:02:01:01 ----C----- -----C---- ---------- ---------- ---------- ---------- ---------- ---------- ------C--- ----------
S*01:02:01:02 ********** ********** ********** ********** ********** ****------ ----CTA--- ---------- ------C--- ----------
S*01:02:01:03 ----C----- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ------C--- ----------
S*01:03 ----C----- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ------C--- ----------
S*01:04 ----C----- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ------C--- ----------
gDNA 201
|
S*01:01:01:01 ACAGGATGAT TTCTTCCCAG AG | GCAGAGAA GGAGGTGCTC AGGCTGTGT | G TAACTATGGG AGACAGATGT GGAGGAGCTC ACCTATGCCA TAATTCCTCC
S*01:01:01:02 ---------- ---------- -- | -------- ---------- --------- | - ---------- ----G----- ---------- ---------- ----------
S*01:02:01:01 ---------- ---------- -- | -------- ---------- --------- | - ---------- ----G----- ---------- ---------- ----------
S*01:02:01:02 ---------- ---------- -- | -------- ---------- --------- | - ---------- ----G----- ---------- ---------- ----------
S*01:02:01:03 ---------- ---------- -- | -------- ---------- --------- | - ---------- ----G----- ---------- ---------- ----------
S*01:03 ---------- ---------- -- | -------- ---------- --------- | - ---------- ----G----- ---------- ---------- ----------
S*01:04 ---------- ---------- -- | -------- ---------- --------- | - ---------- ----G----- ---------- ---------- ----------
gDNA 301
|
S*01:01:01:01 TCTCCCACAT CTCCTGCAGG CTCTGACCGG GTCCTGTTTT TGTTCTACCC CAG | GCAGTGA CAGTGACCAG GGCTGTGATG TGTCTCTCAC AGCTTGTAAA
S*01:01:01:02 ---------- ---------- ---------- ---------- ---------- --- | ------- ---------- ---------- ---------- ----------
S*01:02:01:01 ---------- ---------- --------A- ---------- ---------- --- | ------- ---------- ---------- ---------- ----------
S*01:02:01:02 ---------- ---------- --------A- ---------- ---------- --- | ------- ---------- ---------- ---------- ----------
S*01:02:01:03 ---------- ---------- --------A- ---------- ---------- --- | ------- ---------- ---------- ---------- ----------
S*01:03 ---------- ---------- --------A- ---------- ---------- --- | ------- ---------- ---------- ---------- ----------
S*01:04 ---------- ---------- --------A- ---------- ---------- --- | ------- ---------- ---------- ---------- ----------
gDNA 401
|
S*01:01:01:01 G | GTGGCGTCC TGGAGGGCCT TATGTGGAAG GGGGATGGGG TACAGGGGAC AAGACTGGAT TACGGTGATT CTTTGGGACA CTTTGAGTGT GTAGTGGGGA
S*01:01:01:02 - | --------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
S*01:02:01:01 - | --------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
S*01:02:01:02 - | --------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
S*01:02:01:03 - | --------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
S*01:03 - | --------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ------A---
S*01:04 - | --------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ------A---
gDNA 501
|
S*01:01:01:01 GTTCAGAGTG TTACGCTTTA TGGCCACTGA CCTGAATTTG TTCATGACTA TTGTTTTCTG TAG | CCTGAGG CAGCTGTCTT GTGAGGGACT GAGATGCAGG
S*01:01:01:02 ---------- ---------- ---------- ---------- ---------- ---------- --- | ------- ---------- ---------- ----------
S*01:02:01:01 ---------- ---------- ---------- ---------- ---------- ---------- --- | ------- ---------- ---------- ---------T
S*01:02:01:02 ---------- ---------- ---------- ---------- ---------- ---------- --- | ------- ---------- ---------- ---------T
S*01:02:01:03 ---------- ---------- ---------- ---------- ---------- ---------- --- | ------- ---------- ---------- ---------T
S*01:03 ---------- ---------- ---------- ---------- ---------- ---------- --- | ------- ---------- ---------- ----------
S*01:04 ---------- ---------- ---------- ---------- ---------- ---------- --- | ------- ---------- ---------- ----------
gDNA 601
|
S*01:01:01:01 ATTTCTTCAT GCCGCCCCTT TGTGACTTCA GGAGCCTCTG GTGTCTCTTT CTGCAAAGGC ATCTGAATGT GTCTGTGTCC CTGTTAGCCT AGTGTGAGGA
S*01:01:01:02 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
S*01:02:01:01 ---------- ---T------ ---------- A--------- ---------- ---------- ---------- -----C---- ---------- -A------A-
S*01:02:01:02 ---------- ---T------ ---------- A--------- ---------- ---------- ---------- -----C---- ---------- -A------A-
S*01:02:01:03 ---------- ---T------ ---------- A--------- ---------- ---------- ---------- -----C---- ---------- -A------A-
S*01:03 ---------C ---T------ ---------- A--------- ---------- ---------- ---------- -----C---- ---------- -A------A-
S*01:04 ---------- ---T------ ---------- A--------- ---------- ---------- ---------- -----C---- ---------- -A------A-
gDNA 701
|
S*01:01:01:01 GGTGGAGAGA CCAGCCCTCC CCCATGTCTA CCATGACCCC CTTCCCCATG CTGA | ATTAGC TGACTTTACA AAAAGAAAAT TACCATCAAT AATGTGGATG
S*01:01:01:02 ---------- ---------- ---------- ---------- ---------- ---- | ------ ---------- ---------- ---------- ----------
S*01:02:01:01 ---------- ---------- ---------- ---------- ---------- ---- | ------ ---------- ---------- ---------- ----------
S*01:02:01:02 ---------- ---------- ---------- ---------- ---------- ---- | ------ ---------- ---------- ---------- ----------
S*01:02:01:03 ---------- ---------- ---------- ---------- ---------- ---- | ------ ---------- ---------- ---------- ----------
S*01:03 ---------- ---------- ---------- ---------- ---------- ---- | ------ ---------- ---------- ---------- ----------
S*01:04 ---------- ---------- ---------- ---------- ---------- ---- | ------ ---------- ---------- ---------- ----------
gDNA 801
|
S*01:01:01:01 GGCCTCATCC GATCAGTAGA AGACTCTGAG AGCAGAAACT GAGGTTTCCC AGAGAAGAAG AAATCCTGCC TCAG
S*01:01:01:02 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----
S*01:02:01:01 ---T---C-- ---------- ---------- ---------- ---------- ---------- ---------- ----
S*01:02:01:02 ---T---C-- ---------- ---------- ---------- ---------- ---------- ---------- ----
S*01:02:01:03 ---T---C-- ---------- ---------- ---------- ---------- ---------- ---------- ----
S*01:03 ---T---C-- ---------- ---------- ---------- ---------- ---------- --------** ****
S*01:04 ---T---C-- ---------- ---------- ---------- ---------- ---------- --------** ****
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