diff --git a/.github/workflows/incidence_temporal.yml b/.github/workflows/incidence_temporal.yml new file mode 100644 index 0000000..f4b4527 --- /dev/null +++ b/.github/workflows/incidence_temporal.yml @@ -0,0 +1,32 @@ +name: incidence_temporal + +on: + push: + branches: + - '*' + pull_request: + branches: + - '*' + workflow_dispatch: + +jobs: + notebooks: + runs-on: ubuntu-20.04 + steps: + - uses: actions/checkout@v1 + - name: Set up Python 3.8 + uses: actions/setup-python@v2 + with: + python-version: 3.8 + + - name: Install dependencies + run: pip install jupyter nbconvert nbformat + + - name: Launch notebook + run: jupyter nbconvert --to notebook --execute apps/bc_incidence_over_time.ipynb --ExecutePreprocessor.kernel_name='python3' --output ../notebook_executed + + - name: Upload artifact + uses: actions/upload-artifact@v3 + with: + name: notebook + path: notebook_executed.ipynb diff --git a/.github/workflows/mortality_temporal.yml b/.github/workflows/mortality_temporal.yml new file mode 100644 index 0000000..b3fe254 --- /dev/null +++ b/.github/workflows/mortality_temporal.yml @@ -0,0 +1,32 @@ +name: mortality_temporal + +on: + push: + branches: + - '*' + pull_request: + branches: + - '*' + workflow_dispatch: + +jobs: + notebooks: + runs-on: ubuntu-20.04 + steps: + - uses: actions/checkout@v1 + - name: Set up Python 3.8 + uses: actions/setup-python@v2 + with: + python-version: 3.8 + + - name: Install dependencies + run: pip install jupyter nbconvert nbformat + + - name: Launch notebook + run: jupyter nbconvert --to notebook --execute apps/bc_mortality_over_time.ipynb --ExecutePreprocessor.kernel_name='python3' --output ../notebook_executed + + - name: Upload artifact + uses: actions/upload-artifact@v3 + with: + name: notebook + path: notebook_executed.ipynb diff --git a/.github/workflows/survival.yml b/.github/workflows/survival.yml new file mode 100644 index 0000000..4037052 --- /dev/null +++ b/.github/workflows/survival.yml @@ -0,0 +1,32 @@ +name: survival + +on: + push: + branches: + - '*' + pull_request: + branches: + - '*' + workflow_dispatch: + +jobs: + notebooks: + runs-on: ubuntu-20.04 + steps: + - uses: actions/checkout@v1 + - name: Set up Python 3.8 + uses: actions/setup-python@v2 + with: + python-version: 3.8 + + - name: Install dependencies + run: pip install jupyter nbconvert nbformat + + - name: Launch notebook + run: jupyter nbconvert --to notebook --execute apps/bc_survival.ipynb --ExecutePreprocessor.kernel_name='python3' --output ../notebook_executed + + - name: Upload artifact + uses: actions/upload-artifact@v3 + with: + name: notebook + path: notebook_executed.ipynb diff --git a/README.md b/README.md index 9cfa2e8..53b02d1 100644 --- a/README.md +++ b/README.md @@ -23,6 +23,9 @@ They can be accessed by clicking their respective colab badge below: | Incidence rate world map | Open In Colab | Open In Colab | | Mortality rate world map | Open In Colab | Open In Colab | | Overall cancer statistics | Open In Colab | Open In Colab | +| Survival country comparison | Open In Colab | Open In Colab | +| Cancer incidence over time | Open In Colab | Open In Colab | +| Cancer mortality over time | Open In Colab | Open In Colab | ## [Dependencies](https://github.com/andreped/breast-cancer-stats#dependencies)