exemplary_RNA_aln.fa

>AB003409.1/96-167
GGGCCCAU-A-GCUCAGU---GGU---AGAGUG-C-CUCCU-UUGCAAGGAG-GAU----
--------------------GC--CCUG-GGU-UCG-AA--UCCCA-G-UGGGUCC-A
>AB009835.1/1-71
CAUUAGAU-G-ACUGAA----AG----CAAGUA-C-UGGUC-UCUUAAACCA-UUU----
--------------------AA--UAGUAAAU-UAG-CA--CUUAC-U-UCUAAUG-A
>AB013372.1/8-81
GCGCCCGU-A-GCUCAAUU--GGAU--AGAGCG-U-UUGAC-UACGGAUCAA-AAG----
--------------------GU--UAGG-GGU-UCG-AC--UCCUC-U-CGGGCGC-G
>AB013373.1/3754-3825
GCGGAAGU-A-GUUCAGU---GGU---AGAACA-C-CACCU-UGCCAAGGUG-GGG----
--------------------GU--CGCG-GGU-UCG-AA--UCCCG-U-CUUCCGC-U
>AB017063.1/58819-58900
GUGGACGU-G-CCGGAGU---GGUU--AUCGGG-C-AUGAC-UAGAAAUCAU-GU--GGG
-C---UUU--------GCCCG---CGCA-GGU-UCG-AA--UCCUG-C-CGUUCAC-G
>AB027572.1/4261-4342
GGGUCGAU-G-CCCGAGU---GGUUA-AUGGGG-A-CGGAC-UGUAAAUUCG-UU--GAC
-----AAU---------GUCUA--CGCU-GGU-UCA-AA--UCCAG-C-UCGGCCC-A
>AB031211.1/7799-7884
GCCGGGGU-G-GUGGAAUU--GGCA--GACACA-C-AGGAC-UUAAAAUCCU-GC--GGU
-AG--GUG---A---CUACCG---UGCC-GGU-UCA-AG--UCCGG-C-CCUCGGC-A